Mercurial > repos > oinizan > frogs
diff normalisation.xml @ 11:ab9e3c8ab443 draft
planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit f1287ef131de1eb33c9d59c1b66312fe854a8c64-dirty
| author | oinizan |
|---|---|
| date | Fri, 13 May 2022 15:33:27 +0000 |
| parents | 7bf54edaba24 |
| children | 613b7551f28b |
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--- a/normalisation.xml Thu May 12 11:40:39 2022 +0000 +++ b/normalisation.xml Fri May 13 15:33:27 2022 +0000 @@ -16,7 +16,7 @@ # along with this program. If not, see <http://www.gnu.org/licenses/>. --> <tool id="FROGS_normalisation" name="FROGS Abundance normalisation" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> - <description>Normalise OTUs abundance.</description> + <description>Normalise OTU abundance.</description> <macros> <import>macros.xml</import> @@ -109,7 +109,7 @@ - **Sampling by the number of sequences of the smallest sample** : Automatically detects the number of reads of the smallest sample, and selects this number for all other samples. - **Select number of reads** : Manually select a number of reads. -.. image:: static/images/icon_warning_sml.gif +.. class:: warningmark If the **remove samples** option is enabled, samples whose total number of sequences is lower than the specified number will be removed inside the abundance table. If the option is disabled, the samples will be kept in the analysis but with a number of sequences lower than the specified number (the total number of the sample). @@ -120,7 +120,7 @@ **Sequence file** (normalised_seed.fasta): - The normalised sequences file (format `FASTA <https://en.wikipedia.org/wiki/FASTA_format>`_). + The normalised sequence file (format `FASTA <https://en.wikipedia.org/wiki/FASTA_format>`_). **Abundance file** (normalised_abundance.biom):
