Mercurial > repos > oinizan > frogs

annotate tool_data_table_conf.xml.sample @ 30:fce825ec2c84 draft default tip

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planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 01b92e7e17eb8bc125451bf41684f512cf16d3c5-dirty
author oinizan
date Fri, 02 May 2025 07:44:22 +0000
parents 646bee69560f
children
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27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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1 <tables>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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2 <!-- Location of frogs database files -->
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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3 <table name="frogs_db" comment_char="#">
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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4 <columns>value, name, path</columns>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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5 <file path="${__HERE__}/tool-data/frogs_db.loc" />
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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6 </table>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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7 <table name="frogs_HVL_db" comment_char="#">
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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8 <columns>value, name, path</columns>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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9 <file path="${__HERE__}/tool-data/frogs_HVL_db.loc" />
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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10 </table>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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11 <table name="frogs_contaminant_db" comment_char="#">
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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12 <columns>value, name, path</columns>
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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13 <file path="${__HERE__}/tool-data/frogs_contaminant_db.loc" />
27f57425dc55 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.1 commit 30428631e20fff407dde4d0026d28d3fd0875811"
oinizan
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14 </table>
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7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
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15 <!-- Locations of picrust2 default directory -->
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dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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16 <table name="frogs_picrust2_placeseqs" comment_char="#">
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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17 <columns>value, name, dir, path, placement_tool, version</columns>
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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18 <file path="${__HERE__}/tool-data/frogs_picrust2_placeseqs.loc" />
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7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
parents: 0
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19 </table>
7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
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20 <!-- Locations of picrust2 marker table files -->
25
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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21 <table name="frogs_picrust2_functions" comment_char="#">
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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22 <columns>value, name, path, traits, version</columns>
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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23 <file path="${__HERE__}/tool-data/frogs_picrust2_functions.loc" />
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7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
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24 </table>
7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
parents: 0
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25 <!-- Locations of picrust2 pathway map files -->
25
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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26 <table name="frogs_picrust2_pathways" comment_char="#">
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
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27 <columns>marker, path, value, name, version </columns>
dfaf556d2a20 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 281ada90f8ce8630844ca000aa676ed55901661b-dirty
oinizan
parents: 22
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28 <file path="${__HERE__}/tool-data/frogs_picrust2_pathways.loc" />
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7bf54edaba24 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 3d595459e82ea1674c83543f41c18169c159450e-dirty
oinizan
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29 </table>
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57824202c333 planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2472c451b3e27c98ce60b2e56a78fd3fbe0fb2d6-dirty
oinizan
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30 </tables>