# HG changeset patch
# User iuc
# Date 1632131711 0
# Node ID 759c7fe1633dbbe3085e6e5ac730388e8e82eb7a
# Parent  e246a51e600ce02e993471afd20fa9f9790c2f77
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 4125a5c59656970247dea551c424171bb7623749"

diff -r e246a51e600c -r 759c7fe1633d spades.xml
--- a/spades.xml	Thu Sep 16 15:25:04 2021 +0000
+++ b/spades.xml	Mon Sep 20 09:55:11 2021 +0000
@@ -28,7 +28,7 @@
         GALAXY_MEMORY_GB=\$(( GALAXY_MEMORY_MB / 1024 ));
     fi &&
 
-    spades.py -o . --disable-gzip-output $sc $onlyassembler $careful -t \${GALAXY_SLOTS:-16} -m \${GALAXY_MEMORY_GB:-250}
+    spades.py -o . --tmp-dir "\${TMPDIR:-.}" --disable-gzip-output $sc $onlyassembler $careful -t \${GALAXY_SLOTS:-16} -m \${GALAXY_MEMORY_GB:-250}
     #if not $kmer_choice.auto_kmer_choice:
         -k "$kmer_choice.kmers"
     #end if