# HG changeset patch
# User nilesh
# Date 1380694168 14400
# Node ID e994caf2503dcffd0f6cea457db8b6be224488c0
# Parent  dc3b3b88fbabe377e6ba0b4685cfb16bcbfe18e5
Lance's updates

diff -r dc3b3b88fbab -r e994caf2503d bam2wig.xml
--- a/bam2wig.xml	Thu Jul 18 11:27:43 2013 -0500
+++ b/bam2wig.xml	Wed Oct 02 02:09:28 2013 -0400
@@ -3,12 +3,10 @@
 		converts all types of RNA-seq data from .bam to .wig 
 	</description>
 	<requirements>
-		<requirement type="package" version="2.15.1">R</requirement>
-		<requirement type="package" version="0.1.18">samtools</requirement>
 		<requirement type="package" version="2.3.7">rseqc</requirement>
 	</requirements>
 	<command interpreter="python"> 
-		samtoolshelper.py /home/nilesh/RSeQC-2.3.3/scripts/bam2wig.py -i $input -s $chromsize -o outfile
+		samtoolshelper.py bam2wig.py -i $input -s $chromsize -o outfile
 
 		#if str($strand_type.strand_specific) == "pair"
 			-d