Mercurial > repos > nilesh > rseqc
changeset 2:ebadf9ee2d08
fixed dependencies
author | nilesh |
---|---|
date | Thu, 18 Jul 2013 11:01:08 -0500 |
parents | f92b87abef3d |
children | 71ed55a3515a |
files | tool_dependencies.xml |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/tool_dependencies.xml Thu Jul 18 10:54:06 2013 -0500 +++ b/tool_dependencies.xml Thu Jul 18 11:01:08 2013 -0500 @@ -4,7 +4,7 @@ <package name="rseqc" version="2.3.7"> <install version = "1.0"> <actions> - <action type="download_by_url">https://www.broadinstitute.org/cancer/cga/sites/default/files/data/tools/rnaseqc/RNA-SeQC_v1.1.7.jar</action> + <action type="download_by_url">https://sourceforge.net/projects/rseqc/files/RSeQC-2.3.7.tar.gz</action> <action type="shell_command">python setup.py install --root $INSTALL_DIR/lib/rseqc</action> <action type="set_environment"> <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/rseqc/usr/local/lib/python2.7/site-packages</environment_variable>