# HG changeset patch # User nilesh # Date 1373662168 18000 # Node ID 5b955fc765a3d872dfa967250abb508f67886e52 # Parent 6f78ab9dad969a54aad98f96640cfd1697c502bf corrected env var name diff -r 6f78ab9dad96 -r 5b955fc765a3 RNASeQC.xml --- a/RNASeQC.xml Fri Jul 12 15:46:57 2013 -0500 +++ b/RNASeQC.xml Fri Jul 12 15:49:28 2013 -0500 @@ -2,7 +2,7 @@ RNASeQC: Quality control metrics for RNA-seq data bwa - RNASEQPATH + RNASEQCPATH -jar \$RNASEQCPATH/RNASeQC.jar -r $input1 -t $input2 -s "SampleID|$input3|Notes" -o output