view fastq-join.xml @ 1:6dd8062546e8 default tip

fixed xmls

<tool id="fast-join" name="fastq join">
	<description>Fastq-join: merge overlapping parked end reads</description>
	<requirements>
		<requirement type="package" version="1.2.8">zlib</requirement>
		<requirement type="package" version="0.7.5a">bwa</requirement>
	</requirements>
	<command interpreter="python">
		fastq-join $input1 $input2 -o $output1 -o $output2 -o $output3 

	</command>

	<inputs>

		<param name="input1" type="data"  format="fastq" label="Source file 1"/>
		<param name="input2" type="data" format="fastq" label="Source file 2"/>
	</inputs>

	<outputs>
    		<data format="txt" name="output1" label="output file un1"/>
    		<data format="txt" name="output2" label="output file un2"/>
    		<data format="txt" name="output3" label="output file join"/>

	</outputs>

  <help>
This tool computes GC content from a FASTA file.
  </help>

</tool>