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diff tests/quirks.msa.tsv @ 18:e4d75f9efb90 draft

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planemo upload commit b'4303231da9e48b2719b4429a29b72421d24310f4\n'-dirty
author nick
date Thu, 02 Feb 2017 18:44:31 -0500
parents af383638de66
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tests/quirks.msa.tsv	Thu Feb 02 18:44:31 2017 -0500
@@ -0,0 +1,16 @@
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:1116:22967:7077 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGDGGGGGGGFGGGGGGGGGGGGGFGGGGGGGGGGGGGGGG?FGGGFGGGFGGGFF7BFGDG@EEGGGGGGGCFEG@FGGGGGGGDFFFFGGGGGGGDEGGGGGGGGGGGGGGGFGG76CGGGGD4?DFGFFGGGFFDFFGEDEGFB?EB*-*3;028?)9)46FFAF706>FFFFF::
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:1118:14605:8689 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	FGGGGGCEEEEGGGGGGGGEGGGFGGGEGGGGGGGGGGGGGGGAFGGGDGGGGGGGGGGGGGGGEEDEGAFFDGGGFGGFGGFGGCGGGGGGGGGFGECGCFEGGGGBC7BFGEFGGDGGGGGGGGCGGFCGGGGGEGGGGGGFCFG,7EDCFCFGGF9FGGGFGGGEC7FF@CGGCFCE;BFCGGGG8CEFFBFFFFFFGGGGC7EEEEFGDGCF7C7=CGGGG4<<C<C@EGFD@E0<>?DFGDG55>C335B5=?F?058C4F9FAFF9?::2>9D?24?2
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:1118:21309:6959 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFFGGGGGFGGGGGGGFFFGGGGGDGGGFCFGCFGGF9>DCGFGGGGG;DFFGFGFDCFGFGEGFE@CD0)7@*9F??F?F9@2:>F4)4<<;>FFF>A?8
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:2101:17733:13519 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTACGGTTCCCAAC	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGFGEGGGDGGGGGGGGGGGFGGGGGGGGGGGGGGGGFGGGGGGGFFGGGGGGFGCGCFGFGGGGGGGGGGGGFGGGFGGFGGGG=;;FEEGGEFFGGGGCEGGGGGGEGGEGGGGGFFGGGGGGGGF6>CFFFFGGG77>@CFFFFCE75;>>575BGBFFFFF??F9<F>FB4*434F?6>?BF0
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:2103:23125:15471 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGFGGGCCFGFGGGFGGGDGGFGGFGGGGGGGGGGFGFCFFGGGGGGGGGGGCEBFGG?CFFFGGGGGGGGCFGFGFCFGGGGFGGGGGGFFGFGGGGEFGFG?E@FGFGFEEC>F?G4@FFF@FF:49<F?AFAF?515>:B@??:
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:2104:14576:24265 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTCTCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGCGTAAGTAGTTCGCCAGTTACTAGTTCACGCAACGTTCTTGCCATTGCTACAGCCATCGTGGTGTGTCGCTCGTCGTTTGGTATGGCTTCATTTAGCGCCGGTTCCCCAC	F9FAFCFE7:EGGFGGFFGF@C9,8FEDEGGGFF9CEFFGGGGFCEGC@C@FGGGGGGGGGFGEGEGCG8E999CFGGCFFFFFGF9FGF@CGGFGDFDBFCEEGDD773=FE7:FCFGGGGGGGGBFFGFE,37DBEGG@FCC;DD9FC;@;=@2DF,<@>AEEFG*=C,CEC,*=*=CF9,3BC8EGE*52;+5;9+2++2**=CEEE**/0+07+3C9907CF6+1*<*557)1*)*)38G/))9C)<*5)11**)*0)00-6)**175(4759D(6,).-
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:2104:25265:19405 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCFGGGGGEFGGGGGFGGGGGGGGGFGG?:CF@FEDGGGGFFGGDGGGGGFFGGGGGCECG9CFFGGGGCGGG5EGECGGGGGGGGGGGGGGFC6CFDFFD<C@FCFC*<>F<>>DDE@C:5CFCF)>>FFG)9<=??BF:>)8>B?F???6
+CTGCGACACAATATTGGGCTCCCC	ab	1	@M02286:46:000000000-AEG11:1:2119:22759:6520 1:N:0:1	GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGGCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAAC	GGGGGGGGEGGDGGGGGGGGGGGGGGGG>FGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGEEGGGGGGGGGGGGGGGGGGG>EFFGGGF@CFFCFGGGEGDEGGDEEFFAFFFFGFF6F:EFGGGG>DGFFF*85<7C3).795@3E?GFG?F4F?*8/6F*.:4?29E3.59<:-
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:1116:22967:7077 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAA-CGACGAGCGTGACCCCACGAGG	FGGGGGGGGFGGGGGGGGGGGGGG<FDGGGGGGGGGGGGGGAFGEGGGGGGGGGGGGGGGGGGGGGGGGGGGFGGGGGGGGGGGGGGGGGGGGGG,EFGGGGFGGGGGGGFDGGGGGGDGGFEGGGGGGGC;;FGGGGFGGGCC8BCDFGFCDFFFC9EGGGGGGGG7DGGGEC*:CCF7FFGGFGDCCFGFGGFCG+8?7)95D>G>BFGAFFFAFEA:>BFF;*:>:@?F0(<2:1-399>:?)<<BA9A77?42132?? <?69>>>((-(((*.41(,(((
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:1118:14605:8689 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGACGACCGAAGCAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGACCCGGAGCTGCATGAAGCCATACCCAC-CGACGCGCGTGACACCCCGCTT	FAAFDE8FEDECB6@@CC@7FGEE<FDCEFFFGGGEGGGGGCEFGGGGC8FCCEFCEFGD9FFFGG,:@F8<A6EFGGF<FCCC<<BEAF=CEF9E9<,:,5?9?ADD9F@FFEGGG9?,BE,,CE,9CFG;FEAD9,8CEG6+3@37AD=;DF9A9+38+8D8=8A++3479@EG*,=41253,*4(6-0///;=6+*2*86**(5/;;;++;C1.A8)4>D:?B*).0(344(*(,-((42(.(.)5A)9?0<4<7?+5( (,(,,(((->18:0,((02-92
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:1118:21309:6959 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCACTTTTTTGCACAACCTGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGCATGAAGCCATCCCAAA-CGACGACCGTGACACCACCATT	GGGGGGGGGGFGDCGGGGGGGGDGGGGGGGGFGGGFFFGGGCFGF@CCGFFGGGGGGGGFGGGGFGFCFDFFDEGE?@FFF7FC?FFGGGGGGGAF?FDFFGGGFGFEFGCEFGGGGGGGFEFFGGGGGFDCFGGGGFD@EGGGFEEEFE,EDDEFF5DD@FCFEE>CDCGGD>ED5CDFFGAFFGF@CEEFG4C:A:8?*//C5577?F;FACCFFF4D@EB33=675A1(7284<?9>FB9?B02)6<29???A(23+43 :<767(-(4C<((0)-()(())
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:2101:17733:13519 2:N:0:1	AAGGGCACCCGGGTGGCGGCAACCATAATTCTAAGATTGCTTGGGTGGGGTATTACTTAGCACAGGAAAAGAATCTAAGGAAGGGCAGACAGGAAAGGAATTAATGCATTCCTGCATAACCAAGGAGGGAAAAACCGGCGGCCAACTTCCTTCGACAAAGGTAGGGGGGACCAAAGGGGCAAACCGCTTTTTTCCACAAATGGGGGCATAATGTAACGCCCCTTG-TTGTTGGGGACCGGGCCCGAAAGGACCCAAACCAACACGACGACCCTATCACAAAACGG	B9,,,,:,,,+8+++8C+++++,,,,,,<,,,,,,:9,,,,C,B,B,++++,,,5,,5,,,<E,,,C4E,,+,,,<5,,:,,4B+8+++,,,+,B,,,,:,75,,,,7,,5,,,83,5C3<<+,+,8+++,@,,++++3@*1*1,*,2,,1,,***4:C,,1,,3***28E**;/2***)*1*9*)/9:*7*1*0***)1**1095))))0*00/**))()-80) **)0.439>>4*-(,)((-(()((.((,4((-((4(),((-((-(()()/).))(((4-
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:2103:23125:15471 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGCAGACATAACAAA-CGCCGAGCGTTACACCCCGATG	FGGGGGGFGGGGGGGGGGDGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGCGFGGFGGGGGGGGGGGGGGGGGGGGCEGGGGGGGGGGGG9FGGGGGGGGGGFGGGEBEFGFBFFGGGGGFGGFGGGGGGGGGFDEEEGFGDDFGGGGGG,@EEFEFFGGG6CDEGFEC8?*,79CFCFGGGGDGGFGGGGFGGGF4*8*6=7>FD+788FC7:37GEA@<8F?5:?46C),<(9B90??>?4*)1..406B).5)2 4<((49>07()--4/4(2((-(
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:2104:14576:24265 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACATTAAGAGAATTCTGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAAAGATTGGAGGAACGAAGTGTATAACCACTTTTTTGCACAACATGCGGGATCGTGTAACTCGCTTTGTTCGTTGCTCACCGGAAGCGATAGCGACCATGCCACC-CGTACCGCGGTCAACACCGTTT	<<F,;C6CFGGCFG7C:BCD7C:9,,CCFG,,,<,,,<E,<FC6<:DFCAEF,,,66CC<9CFGGGDGCE6=ECFA<F<A7:@FGC4ED,<A,9,:,C,,4,,,,,5@A,?F,55EFFFGGG@9,4=,9E;@DGGF9,E+++++3A@,6,=;DD,6@,@=,6,,7,,+6+,0+4@8+,,,+2257,3@,2,219@+4+*/406**)*02?*/;C)=>8+).**/)1)1):;4(++./26()(((((0)(.,)(0())(.64( ()--()()(.((,0).(((.((
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:2104:25265:19405 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAACGAGCTAACCGCTTTTTTGCACAACCTGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCTGAGCTGAATGAAGCCCTACCAAC-CGACGAGCGTGACACCACGATG	GFFGGGGGGFGGDEFGGGGGGGGGGGGGGGGFGGAD<FAFGDG9FGGCEGFFFGGCGGGCGGGGGGC@FEFGGFFGGGG?7FGGFGGGGGGGDGDFFFDFFFGDGGGFE<FEFDC@<FFEFFFGCCFAF9FCAFFGG?EFGGGGGGCFFGA@>EF;E?DFGGF?EE@+8@DD6E>*@C574=B:DEG>=*ADGBFGC=D4*;*;76C378;A6CACCDD59CC()+*.8*.)45*3>7((0,,54)/*)426))(.4:())( 4)--6073(8?((633(36(((
+CTGCGACACAATATTGGGCTCCCC	ab	2	@M02286:46:000000000-AEG11:1:2119:22759:6520 2:N:0:1	AAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACCACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGACTGAAGCACTACCCAA-CGACTACCGTCACACCACGATT	GGGFFCFGGGGEGGGGGGGGGGDFGGGGGGGGGGFGAEGGGFGGFFGGGGFGGGGGGGFGGGGGGGCFGDDFGGGGGGGGGGGEDFGGFGGGGGFGGFFGGGGGGFGFFGFCFFGFCD@?FDGGFFG4EFFFGGDGGFGGGEGGFFGFDA9EFGG=9,@F+8+@>E6@E68:E5*;7C>CCE@FFGD9?96:57DFGFCGBC8?3(:CD3;8:@:+8+;3CDE<+27:FF5,:5A,73*((170(4).*/4+,)(.:?B:<, 8<(-((((-((((*,7(4((((