comparison align_families.xml @ 27:f33b89fe9f82 draft

planemo upload for repository https://github.com/galaxyproject/dunovo commit b'e513259f9701a68e53baddaeedfa51406df857bf\n'-dirty

26:a2dc1e1c10db

<?xml version="1.0"?>
<tool id="align_families" name="Du Novo: Align families" version="0.6">
  <description>of duplex sequencing reads</description>
  <requirements>
    <requirement type="package" version="7.221">mafft</requirement>
    <requirement type="package" version="0.6">duplex</requirement>
    <requirement type="set_environment">DUPLEX_DIR</requirement>
    <!-- TODO: require Python 2.7 -->
  </requirements>
  <command detect_errors="exit_code">python "\$DUPLEX_DIR/align_families.py" -p \${GALAXY_SLOTS:-1} '$input' &gt; '$output'
  </command>
  <inputs>
    <param name="input" type="data" format="tabular" label="Input reads" help="with barcodes, grouped by family"/>
  </inputs>
  <outputs>

27:f33b89fe9f82

<?xml version="1.0"?>
<tool id="align_families" name="Du Novo: Align families" version="0.6">
  <description>of duplex sequencing reads</description>
  <requirements>
    <requirement type="package" version="7.221">mafft</requirement>
    <requirement type="package" version="0.6.1">duplex</requirement>
    <!-- TODO: require Python 2.7 -->
  </requirements>
  <command detect_errors="exit_code">align_families.py -p \${GALAXY_SLOTS:-1} '$input' &gt; '$output'
  </command>
  <inputs>
    <param name="input" type="data" format="tabular" label="Input reads" help="with barcodes, grouped by family"/>
  </inputs>
  <outputs>