Mercurial > repos > nick > duplex
comparison correct_barcodes.xml @ 28:71b765a4c494 draft default tip
planemo upload for repository https://github.com/galaxyproject/dunovo commit b'53eba8ce731a5f8afd739f9b9c01229b54880e6c\n'-dirty
| author | nick |
|---|---|
| date | Sat, 18 Feb 2017 04:56:38 -0500 |
| parents | f33b89fe9f82 |
| children |
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| 27:f33b89fe9f82 | 28:71b765a4c494 |
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| 3 <description>of duplex sequencing reads</description> | 3 <description>of duplex sequencing reads</description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="2.1.0">bowtie2</requirement> | 5 <requirement type="package" version="2.1.0">bowtie2</requirement> |
| 6 <requirement type="package" version="0.1.18">samtools</requirement> | 6 <requirement type="package" version="0.1.18">samtools</requirement> |
| 7 <requirement type="package" version="1.9">networkx</requirement> | 7 <requirement type="package" version="1.9">networkx</requirement> |
| 8 <requirement type="package" version="0.6.1">duplex</requirement> | 8 <requirement type="package" version="0.6.2">duplex</requirement> |
| 9 <!-- TODO: require Python 2.7 --> | 9 <!-- TODO: require Python 2.7 --> |
| 10 </requirements> | 10 </requirements> |
| 11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' > '$output' | 11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' > '$output' |
| 12 </command> | 12 </command> |
| 13 <inputs> | 13 <inputs> |
