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annotate tool_dependencies.xml @ 8:e504cc1d5a76 draft

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author nick
date Mon, 23 Nov 2015 19:11:52 -0500
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="mafft" version="7.221">
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4 <repository changeset_revision="97adbeef2294" name="mafft" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="duplex" version="0.1">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">https://github.com/makrutenko/duplex/archive/master.tar.gz</action>
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10 <action type="shell_command">make</action>
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11 <action type="move_directory_files">
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12 <source_directory>.</source_directory>
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13 <destination_directory>$INSTALL_DIR</destination_directory>
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14 </action>
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15 <action type="set_environment">
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16 <environment_variable action="set_to" name="DUPLEX_DIR">$INSTALL_DIR</environment_variable>
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17 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 </package>
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22 </tool_dependency>