Mercurial > repos > nick > dunovo
view tool_dependencies.xml @ 19:e5d1d90c099b draft
planemo upload for repository https://github.com/galaxyproject/dunovo commit b'9101e88acb2d3dc022c47e0663fec1f6b9fa58a5\n'-dirty
author | nick |
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date | Fri, 10 Nov 2017 08:50:09 -0500 |
parents | 075ef42d1ce5 |
children | f509cd1d5a78 |
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<?xml version="1.0"?> <tool_dependency> <package name="bowtie2" version="2.2.5"> <repository changeset_revision="f5582ac5ba3c" name="package_bowtie_2_2_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="samtools" version="0.1.18"> <repository changeset_revision="f499719dad6e" name="package_samtools_0_1_18" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="mafft" version="7.221"> <repository changeset_revision="dd4a533a0e3c" name="mafft" owner="rnateam" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="networkx" version="1.10"> <repository changeset_revision="3469a6858fd4" name="package_networkx_1_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="dunovo" version="2.0.9"> <install version="1.0"> <actions> <action sha256sum="6f5295b8eae0e161ee3bd28829ca140657743c695624ffc7f467f13eab2c547c" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v2.0.9.tar.gz</action> <action type="shell_command">make</action> <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable> </action> <!-- Note: This does not install the submodules. Functionality they provide will not be available. --> </actions> </install> </package> </tool_dependency>