Mercurial > repos > nick > allele_counts_1

view tests/real.csv.out @ 10:db6f217dc45a

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Uploaded tarball. Version 1.1. - Added stranded output. - Added, tested no-filter mode. - now prints all sites. - Changed handling of minor allele ties. - Added test datasets. - Revised help text.
author nick
date Fri, 06 Sep 2013 20:37:07 -0400
parents
children 44c3abd1b767
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THYROID	chr1	246704250	29	0	0	0	29	1	A	.	0.0
THYROID	chr1	246704257	0	0	0	71	71	1	T	.	0.0
THYROID	chr1	246704268	104	0	0	0	104	1	A	.	0.0
THYROID	chr1	246704269	0	0	0	105	105	1	T	.	0.0
THYROID	chr1	246704363	0	72	3	0	75	0	C	G	0.04
THYROID	chr1	246704437	5	130	0	0	135	0	C	A	0.03704
THYROID	chr1	246707878	0	0	131	0	131	1	G	.	0.0
THYROID	chr1	246714587	30	0	43	0	73	2	G	A	0.41096
THYROID	chr1	246729216	1	0	1	90	92	0	T	G	0.01087
THYROID	chr7	91502881	0	0	0	26	26	1	T	.	0.0
THYROID	chr7	91502897	7	36	0	0	43	0	C	A	0.16279