Mercurial > repos > nate > data_manager_hisat2_index_builder

annotate tool_data_table_conf.xml.sample @ 4:496a8a7f35f9 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit eca2a7b4b6505f9ff30839ae7e85f4e6c4e77754
author nate
date Tue, 29 Jul 2025 17:55:11 +0000
parents f7c16185b8e1
children
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f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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1 <!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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2 <tables>
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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3 <!-- Locations of all fasta files under genome directory -->
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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4 <table name="all_fasta" comment_char="#" allow_duplicate_entries="False">
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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5 <columns>value, dbkey, name, path</columns>
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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6 <file path="tool-data/all_fasta.loc" />
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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7 </table>
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
diff changeset
8 <!-- Locations of indexes in the hisat mapper format -->
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
diff changeset
9 <table name="hisat2_indexes" comment_char="#" allow_duplicate_entries="False">
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
diff changeset
10 <columns>value, dbkey, name, path</columns>
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
diff changeset
11 <file path="tool-data/hisat2_indexes.loc" />
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
diff changeset
12 </table>
f7c16185b8e1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_hisat2_index_builder commit 36a598c1014c3fa9696c4bdbf13d98a9e1e528c9
nate
parents:
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13 </tables>