Mercurial > repos > nate > data_manager_build_kraken2_database

diff data_manager_conf.xml @ 0:c13785ca6192 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 39e87c095e426fc3f147d55de0434cd54ae0354a
author nate
date Wed, 06 Nov 2024 20:00:39 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Nov 06 20:00:39 2024 +0000
@@ -0,0 +1,18 @@
+<data_managers>
+    <data_manager tool_file="data_manager/kraken2_build_database.xml" id="kraken2_build_database">
+        <data_table name="kraken2_databases">
+            <output>
+                <column name="value"/>
+                <column name="name"/>
+                <column name="path" output_ref="out_file">
+                    <move type="directory">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>