# HG changeset patch
# User mzytnicki
# Date 1366799301 14400
# Node ID 15bcd04d07beb479e256ce5ddc36f2bca33fb5fa
# Parent  c181ca34432253ce5da2377d4ef7d1f2b2cdde3f
Uploaded

diff -r c181ca344322 -r 15bcd04d07be tool_dependencies.xml
--- a/tool_dependencies.xml	Wed Apr 24 06:24:45 2013 -0400
+++ b/tool_dependencies.xml	Wed Apr 24 06:28:21 2013 -0400
@@ -3,16 +3,7 @@
     <set_environment version="1.0">
         <environment_variable name="PYTHONPATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable>
     </set_environment>
-    <package name="samtools" version="0.1.12">
-        <install version="1.0">
-            <actions>
-				<action type="shell_command">R --slave --no-save --no-restore --quiet -e 'if (!require("RColorBrewer")){install.packages("RColorBrewer", repos = c("http://cran.rstudio.com/"), dependencies = TRUE)}'</action>
-				<action type="shell_command">R --slave --no-save --no-restore --quiet -e 'if (!require("Hmisc")){install.packages("Hmisc", repos = c("http://cran.rstudio.com/"), dependencies = TRUE)}'</action>
-            </actions>
-        </install>
-        <readme>Compiling SAMtools requires the ncurses and zlib development libraries.</readme>
-    </package>
-	<package name="R_PACKAGES">
+	<package name="R_PACKAGES" version="1.0">
 		<install version="1.0">
 			<actions>
 				<action type="shell_command">R --slave --no-save --no-restore --quiet -e 'if (!require("RColorBrewer")){install.packages("RColorBrewer", repos = c("http://cran.rstudio.com/"), dependencies = TRUE)}'</action>