# HG changeset patch # User mzeidler # Date 1380113772 14400 # Node ID c3e2db435a8357a3a14ab744601b8c4d4e1c951a # Parent e8a31f1f4e374b31f7514f9a7a5d639db114510c Deleted selected files diff -r e8a31f1f4e37 -r c3e2db435a83 ._datatypes_conf.xml Binary file ._datatypes_conf.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._fasta_to_bwa_index_converter.xml Binary file ._fasta_to_bwa_index_converter.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._fasta_to_star_index_converter.xml Binary file ._fasta_to_star_index_converter.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._jqBarGraph.1.1.min.js Binary file ._jqBarGraph.1.1.min.js has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._jqBarGraph.2.1.js Binary file ._jqBarGraph.2.1.js has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._jqBarGraph.2.1.min.js Binary file ._jqBarGraph.2.1.min.js has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._jquery-1.10.2.min.js Binary file ._jquery-1.10.2.min.js has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._tool_dependencies.xml Binary file ._tool_dependencies.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vhom.py Binary file ._vhom.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vhom_region.xml Binary file ._vhom_region.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vhom_regionplot.py Binary file ._vhom_regionplot.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vhom_regions.py Binary file ._vhom_regions.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vmap.py Binary file ._vmap.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vmap_dnaindex.py Binary file ._vmap_dnaindex.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vmap_dnamap.xml Binary file ._vmap_dnamap.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vmap_rnaindex.py Binary file ._vmap_rnaindex.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vmap_rnamap.xml Binary file ._vmap_rnamap.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vref.py Binary file ._vref.py has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vref_blast.xml Binary file ._vref_blast.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 ._vref_fasta.xml Binary file ._vref_fasta.xml has changed diff -r e8a31f1f4e37 -r c3e2db435a83 jqBarGraph.1.1.min.js --- a/jqBarGraph.1.1.min.js Wed Sep 25 08:55:00 2013 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,34 +0,0 @@ -/** - * jqBarGraph - jQuery plugin - * @version: 1.1 (2011/04/03) - * @requires jQuery v1.2.2 or later - * @author Ivan Lazarevic - * Examples and documentation at: http://www.workshop.rs/jqbargraph/ - * - * Dual licensed under the MIT and GPL licenses: - * http://www.opensource.org/licenses/mit-license.php - * http://www.gnu.org/licenses/gpl.html - * - */ - -(function($){var opts=new Array;var level=new Array;$.fn.jqBarGraph=$.fn.jqbargraph=function(options){init=function(el){opts[el.id]=$.extend({},$.fn.jqBarGraph.defaults,options);$(el).css({'width':opts[el.id].width,'height':opts[el.id].height,'position':'relative','text-align':'center'});doGraph(el);};sum=function(ar){total=0;for(val in ar){total+=ar[val];} -return total.toFixed(2);};max=function(ar){maxvalue=0;for(var val in ar){value=ar[val][0];if(value instanceof Array)value=sum(value);if(parseFloat(value)>parseFloat(maxvalue))maxvalue=value;} -return maxvalue;};maxMulti=function(ar){maxvalue=0;maxvalue2=0;for(var val in ar){ar2=ar[val][0];for(var val2 in ar2){if(ar2[val2]>maxvalue2)maxvalue2=ar2[val2];} -if(maxvalue2>maxvalue)maxvalue=maxvalue2;} -return maxvalue;};doGraph=function(el){arr=opts[el.id];data=arr.data;if(data==undefined){$(el).html('There is not enought data for graph');return;} -if(arr.sort=='asc')data.sort(sortNumberAsc);if(arr.sort=='desc')data.sort(sortNumberDesc);legend='';prefix=arr.prefix;postfix=arr.postfix;space=arr.barSpace;legendWidth=arr.legend?arr.legendWidth:0;fieldWidth=($(el).width()-legendWidth)/data.length;totalHeight=$(el).height();var leg=new Array();max=max(data);colPosition=0;for(var val in data){valueData=data[val][0];if(valueData instanceof Array) -value=sum(valueData);else -value=valueData;lbl=data[val][1];color=data[val][2];unique=val+el.id;if(color==undefined&&arr.colors==false) -color=arr.color;if(arr.colors&&!color){colorsCounter=arr.colors.length;if(colorsCounter==colPosition)colPosition=0;color=arr.colors[colPosition];colPosition++;} -if(arr.type=='multi')color='none';if(lbl==undefined)lbl=arr.lbl;out="