# HG changeset patch
# User mzeidler
# Date 1380046952 14400
# Node ID 4cc84d6a7b211f1eec40155a7b6461ac3a42c339
# Parent 36a847fdcc493aae86da8c4af205b4e29f3b5f86
Uploaded
diff -r 36a847fdcc49 -r 4cc84d6a7b21 fasta_to_bwa_index_converter.xml
--- a/fasta_to_bwa_index_converter.xml Tue Sep 24 14:18:42 2013 -0400
+++ b/fasta_to_bwa_index_converter.xml Tue Sep 24 14:22:32 2013 -0400
@@ -4,9 +4,7 @@
bwa
samtools
virana_python
- numpy
- biopython
- htseq
+
vmap_dnaindex.py --html_file $output --index_dir ${output.files_path} --dir ${output.files_path} --reference_file $input 2>&1