# HG changeset patch # User mvdbeek # Date 1488968052 18000 # Node ID 3c803db023b8b8f5b402795f79de438ae9074602 # Parent 04e14e0da33670f59b8693a6b095f3cb3affacdb planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 9ff264c527e1fe33950b33f2041c08f6c5758a1e diff -r 04e14e0da336 -r 3c803db023b8 add_matesequence.xml --- a/add_matesequence.xml Sun Mar 05 13:29:29 2017 -0500 +++ b/add_matesequence.xml Wed Mar 08 05:14:12 2017 -0500 @@ -1,7 +1,7 @@ - + into tag field - readtagger + readtagger add_matesequence --version + modifies proper_pair flag in bam files - readtagger + readtagger + from multiple bam files macros.xml - readtagger + readtagger + in bam files - readtagger + readtagger findcluster --version + of supplementary alignments + + readtagger + + update_mapq --version + + + + + + + + + + + + + + + + + diff -r 04e14e0da336 -r 3c803db023b8 write_supplementary_fastq.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/write_supplementary_fastq.xml Wed Mar 08 05:14:12 2017 -0500 @@ -0,0 +1,37 @@ + + from SAM/BAM alignment files as FASTQ + + readtagger + + write_supplementary_fastq --version + + + + + + + + + + + + + + +