# HG changeset patch
# User morinlab
# Date 1485708171 18000
# Node ID 235c8e5dfece263f91bfc45489ed62cd5d25a4f2
# Parent  12d83c22866a76df547779b79fa2aa16283f48ec
Uploaded

diff -r 12d83c22866a -r 235c8e5dfece sequenza_pipeline.xml
--- a/sequenza_pipeline.xml	Sun Jan 29 11:13:03 2017 -0500
+++ b/sequenza_pipeline.xml	Sun Jan 29 11:42:51 2017 -0500
@@ -27,7 +27,7 @@
     2>&1 ;
 
   cat ./output/*segments.txt > $output;
-
+  
   </command>
 <inputs>
     <conditional name="sampleid_source">
@@ -57,7 +57,7 @@
   <outputs>
     <data name="output" format="seg,txt"/>
     <collection name="list_output" type="list" description="Sequenza outputs">
-      <discover_datasets pattern="__name_and_ext__" directory="output"/>
+      <discover_datasets pattern="__name_and_ext__" directory="output" visible="true"/>
     </collection> 
   </outputs>
 </tool>