# HG changeset patch # User morinlab # Date 1481311906 18000 # Node ID b2e627e119cd9a1a7cb32bb1070a2275718ee9dc # Parent 96933906d55692a2e19f8c2675b860271c956b9a Uploaded diff -r 96933906d556 -r b2e627e119cd radia.xml --- a/radia.xml Sun Dec 04 18:17:26 2016 -0500 +++ b/radia.xml Fri Dec 09 14:31:46 2016 -0500 @@ -29,7 +29,7 @@ for i in \$(samtools view -H normal.bam | grep SQ | cut -f2 | tail -n+2 | cut -c4- ); do #end if - python \$RADIA_INSTALL_DIR/radia_src/scripts/radia.py + python \$RADIA_INSTALL_DIR/radia_src/radia.py test \$i -n normal.bam