diff tool-data/all_fasta.loc.sample @ 3:f8ea4d4dd682 draft

Uploaded

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+++ b/tool-data/all_fasta.loc.sample	Sun Dec 04 15:44:19 2016 -0500
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+#This file lists the locations and dbkeys of all the fasta files
+#under the "genome" directory (a directory that contains a directory
+#for each build). The script extract_fasta.py will generate the file
+#all_fasta.loc. This file has the format (white space characters are
+#TAB characters):
+#
+#<unique_build_id>      <dbkey>         <display_name>  <file_path>
+#
+#So, all_fasta.loc could look something like this:
+#
+#apiMel3        apiMel3 Honeybee (Apis mellifera): apiMel3              /path/to/genome/apiMel3/apiMel3.fa
+#hg19canon      hg19            Human (Homo sapiens): hg19 Canonical            /path/to/genome/hg19/hg19canon.fa
+#hg19full       hg19            Human (Homo sapiens): hg19 Full                 /path/to/genome/hg19/hg19full.fa
+#
+#Your all_fasta.loc file should contain an entry for each individual
+#fasta file. So there will be multiple fasta files for each build,
+#such as with hg19 above.