|
0
|
1 <?xml version="1.0"?>
|
|
|
2 <tool_dependency>
|
|
|
3 <package name="htslib" version="1.3.2">
|
|
|
4 <install version="1.0">
|
|
|
5 <actions>
|
|
|
6 <action type="download_by_url">https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2</action>
|
|
|
7 <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
|
|
|
8 <action type="shell_command">make</action>
|
|
|
9 <action type="shell_command">make install</action>
|
|
|
10 <action type="set_environment">
|
|
|
11 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
|
|
|
12 <environment_variable action="set_to" name="HTSLIB_ROOT">$INSTALL_DIR</environment_variable>
|
|
|
13 <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
|
|
|
14 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
|
|
|
15 </action>
|
|
|
16 </actions>
|
|
|
17 </install>
|
|
|
18 <readme />
|
|
|
19 </package>
|
|
|
20 </tool_dependency>
|
