comparison oncoprintplus.xml @ 4:2877b1ba1250 draft default tip

planemo upload for repository https://github.com/morinlab/tools-morinlab/tree/master/tools/oncoprintplus commit 4ef2d91b7c1686a2696b92fe538d4aec51d05e40-dirty

3:1e33e2121edb

<tool id="oncoprintplus" name="OncoPrintPlus" version="1.0.0">

  <description>
    creates a summary matrix plot of cohort wide mutations
  </description>

  <requirements>
    <requirement type="binary">Rscript</requirement>    
    <requirement type="package" version="3.2.1">R</requirement>
    <requirement type="package" version="1.0">cancer_genomics_functions</requirement>

    </section>
  </inputs>
  <outputs>
    <data format="pdf" name="output"/>
  </outputs>
</tool>

4:2877b1ba1250

<tool id="oncoprintplus" name="OncoPrintPlus" version="1.0.0">

  <description>
    creates a summary matrix plot of cohort wide mutations
  </description>

  <macros>
      <import>citations.xml</import>
  </macros>

  <requirements>
    <requirement type="binary">Rscript</requirement>    
    <requirement type="package" version="3.2.1">R</requirement>
    <requirement type="package" version="1.0">cancer_genomics_functions</requirement>

    </section>
  </inputs>
  <outputs>
    <data format="pdf" name="output"/>
  </outputs>
  <help>
  https://labs.oicr.on.ca/boutros-lab/software/bpg
  </help>
  <citations>
      <expand macro="morinlab_citation"/>
      <expand macro="galaxy_citation"/>
  </citations>  
</tool>