# HG changeset patch
# User morinlab
# Date 1481072634 18000
# Node ID 7de2cc3a24af5e019f42d55dc14c8dde187fd41a
# Parent  2864eb962e5a0d88c95d068d9ce75f2228bb71e6
Uploaded

diff -r 2864eb962e5a -r 7de2cc3a24af mutationseq.xml
--- a/mutationseq.xml	Tue Dec 06 19:51:11 2016 -0500
+++ b/mutationseq.xml	Tue Dec 06 20:03:54 2016 -0500
@@ -99,8 +99,8 @@
   --threshold $advancedsettings.filter_prob
 
   | grep -v ".*no somatic mutation calls.*" >> ./output_noheader;
-  echo "##fileformat=VCFv4.2
-  #CHROM\tPOS\tID\tREF\tALT\tQUAL\tFILTER\tINFO" > ./minimal_vcf_header;
+  echo "\##fileformat=VCFv4.2" > ./minimal_vcf_header;
+  echo "#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO" >> ./minimal_vcf_header;
   cat ./minimal_vcf_header ./output_noheader > $output
   #if $interval
     ; done