Mercurial > repos > morinlab > igv_screenshot

changeset 4:814f48c1bf13 draft default tip

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Uploaded
author morinlab
date Sun, 04 Dec 2016 18:27:40 -0500
parents 460dff3a6374
children
files tool_dependencies.xml
diffstat 1 files changed, 26 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Sun Dec 04 18:27:40 2016 -0500
@@ -0,0 +1,26 @@
+<?xml version="1.0"?>
+
+<tool_dependency>
+	<package name="igv" version="2.3.88"> 
+    
+        <install version="1.0">
+            <actions>                				
+                <action type="download_by_url">http://data.broadinstitute.org/igv/projects/downloads/IGVSource_2.3.88.zip</action>                 
+                <action type="shell_command"> chmod a+x igv.sh</action>
+                <action type="move_directory_files">
+                    <source_directory>.</source_directory>
+                    <destination_directory>$INSTALL_DIR</destination_directory>
+                </action>      
+                <action type="set_environment">
+                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                </action>      
+            </actions>
+         
+       </install>
+        
+        <readme>
+			Downloads and installs the igv 2.3.88 package. 
+        </readme>
+    </package>      
+</tool_dependency>
+