view plot.r @ 0:e3afe097e80a draft default tip

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author moneycat
date Thu, 27 Jul 2017 22:24:59 -0400
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cluster_plot <- function(result){
  library(ggdendro)
  library(ggplot2)
  hc=hclust(dist(as.matrix(rbind(result))))
  cluster_plot=ggdendrogram(hc, theme_dendro = FALSE)+ labs(title="Cluster Dendrogram",x=NULL,y=NULL)
  cluster_plot
}

bar_plot <- function(result){
  library(ggplot2)
  library(reshape2)
  library(plyr)
  df.m <- melt(result)
  df.m <- rename(df.m, c(Var1 = "Sample", Var2 = "Cell_type"))
  a <- ggplot(df.m,aes(x=Sample,y=value,fill=Cell_type))+labs(x=NULL, y="Cell %",fill = NULL,title = "Barplot")
  bar_plot <- a + geom_bar(stat = "identity", position = "stack")
  immigration_theme <- theme_update(axis.text.x = element_text(angle = 90))
  bar_plot
}