comparison plot.r @ 0:e3afe097e80a draft default tip

First commit
author moneycat
date Thu, 27 Jul 2017 22:24:59 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:e3afe097e80a
1 cluster_plot <- function(result){
2 library(ggdendro)
3 library(ggplot2)
4 hc=hclust(dist(as.matrix(rbind(result))))
5 cluster_plot=ggdendrogram(hc, theme_dendro = FALSE)+ labs(title="Cluster Dendrogram",x=NULL,y=NULL)
6 cluster_plot
7 }
8
9 bar_plot <- function(result){
10 library(ggplot2)
11 library(reshape2)
12 library(plyr)
13 df.m <- melt(result)
14 df.m <- rename(df.m, c(Var1 = "Sample", Var2 = "Cell_type"))
15 a <- ggplot(df.m,aes(x=Sample,y=value,fill=Cell_type))+labs(x=NULL, y="Cell %",fill = NULL,title = "Barplot")
16 bar_plot <- a + geom_bar(stat = "identity", position = "stack")
17 immigration_theme <- theme_update(axis.text.x = element_text(angle = 90))
18 bar_plot
19 }
20