# HG changeset patch
# User moheydarian
# Date 1491943415 14400
# Node ID bd1c3f88daa9e6dd3a066d1e89605a9cdd5d3e51
# Parent  9673586abd7a094898f12cd376ea598493317148
Uploaded

diff -r 9673586abd7a -r bd1c3f88daa9 ggplot_histogram.xml
--- a/ggplot_histogram.xml	Sun Mar 12 20:37:03 2017 -0400
+++ b/ggplot_histogram.xml	Tue Apr 11 16:43:35 2017 -0400
@@ -1,4 +1,4 @@
-<tool id="ggplot_histogram" name="Histogram w ggplot2" version="0.1.2">
+<tool id="ggplot_histogram" name="Histogram w ggplot2" version="0.1.3">
     <requirements>
         <requirement type="package">r-getopt</requirement>
         <requirement type="package">r-ggplot2</requirement>
@@ -9,7 +9,7 @@
     </stdio>
     <command><![CDATA[
         Rscript ${__tool_directory__}/ggplotscripthistogram.R --input "$input1" --title "$title" 
-        --xlab "$xlab" --ylab "$ylab" --transform "$transformation.transform" --scaling "$scaling.Plot_scaling" 
+        --xlab "$xlab" --ylab "$ylab" --transform "$transformation.transform" --scaling "$scaling.Plot_scaling" --density "$distribution.density"
         --colorscheme "$coloring.colorscheme" --dim "$dimensions.plotdim" --facet "$group.facet" 
         --size "$size" --binwidth "$binwidth" --legend "$showlegend.legend" --output "Rplot.pdf"
         #if str( $coloring.colorscheme ) == "Defined":
@@ -57,6 +57,12 @@
               <option value="log10plus1">Log10(value+1) transform my data</option>
             </param>
         </conditional>
+        <conditional name="distribution">
+            <param name="density" type="select" label="Advanced - plot counts or density">
+              <option value="counts">Plot counts on the y-axis</option>
+              <option value="density">Plot frequency on the y-axis</option>
+            </param>
+        </conditional>
         <conditional name="group">
             <param name="facet" type="select" label="Advanced - faceting">
               <option value="none">Plot my groups on one plot</option>