Mercurial > repos > moheydarian > ggplot_histogram
comparison ggplot_histogram.xml @ 4:25c690797274 draft
Uploaded
| author | moheydarian |
|---|---|
| date | Sun, 12 Mar 2017 19:27:48 -0400 |
| parents | 6131fe8dc7e8 |
| children | dafa19165908 |
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| 3:6131fe8dc7e8 | 4:25c690797274 |
|---|---|
| 6 </requirements> | 6 </requirements> |
| 7 <stdio> | 7 <stdio> |
| 8 <exit_code range="1:" /> | 8 <exit_code range="1:" /> |
| 9 </stdio> | 9 </stdio> |
| 10 <command><![CDATA[ | 10 <command><![CDATA[ |
| 11 Rscript ${__tool_directory__}/ggplotscripthistogram.R --input "$input1" --title "$title" --xlab "$xlab" --ylab "$ylab" --transform "$transformation.transform" --scaling "$scaling.Plot_scaling" --colorscheme "$coloring.colorscheme" --dim "$dimensions.plotdim" --facet "$group.facet" --size "$size" --binwidth "$binwidth" --output "Rplot.pdf" | 11 Rscript ${__tool_directory__}/ggplotscripthistogram.R --input "$input1" --title "$title" |
| 12 --xlab "$xlab" --ylab "$ylab" --transform "$transformation.transform" --scaling "$scaling.Plot_scaling" | |
| 13 --colorscheme "$coloring.colorscheme" --dim "$dimensions.plotdim" --facet "$group.facet" | |
| 14 --size "$size" --binwidth "$binwidth" --legend "$legend" --output "Rplot.pdf" | |
| 12 #if str( $coloring.colorscheme ) == "Defined": | 15 #if str( $coloring.colorscheme ) == "Defined": |
| 13 --colors ${coloring.colors} | 16 --colors ${coloring.colors} |
| 14 --colororder ${coloring.colororder} | 17 --colororder ${coloring.colororder} |
| 15 #else: | 18 #else: |
| 16 --colors=irrelevant | 19 --colors=irrelevant |
| 137 <when value="Defined"> | 140 <when value="Defined"> |
| 138 <param name="woutputdim" size="4" type="float" value="7" label="width of output (inches)" /> | 141 <param name="woutputdim" size="4" type="float" value="7" label="width of output (inches)" /> |
| 139 <param name="houtputdim" size="4" type="float" value="7" label="height of output (inches)" /> | 142 <param name="houtputdim" size="4" type="float" value="7" label="height of output (inches)" /> |
| 140 </when> | 143 </when> |
| 141 </conditional> | 144 </conditional> |
| 145 <conditional name="legend"> | |
| 146 <param name="legend" type="select" label="Legend options"> | |
| 147 <option value="TRUE">Include legend on plot</option> | |
| 148 <option value="FALSE">Hide legend</option> | |
| 149 </param> | |
| 150 </conditional> | |
| 142 </inputs> | 151 </inputs> |
| 143 <outputs> | 152 <outputs> |
| 144 <!-- <data name="output1" format="png" from_work_dir="Rplot.png"/> --> | 153 <!-- <data name="output1" format="png" from_work_dir="Rplot.png"/> --> |
| 145 <data name="output1" format="pdf" from_work_dir="Rplot.pdf"/> | 154 <data name="output1" format="pdf" from_work_dir="Rplot.pdf"/> |
| 146 </outputs> | 155 </outputs> |