comparison batch-consistency-analysis.r @ 24:bd2ff5799c1a draft default tip

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23:26f40aca64c5

# read the length of the chromosomes, which will be used to concatenate chr's
# chr.file <- "genome_table.txt"
# args[8] is the gtable
chr.file <- args[8]

chr.size <- read.table(chr.file)

# setting output files
r.output <- args[9]
overlap.output <- args[10]
npeaks.output <- args[11]

24:bd2ff5799c1a

# read the length of the chromosomes, which will be used to concatenate chr's
# chr.file <- "genome_table.txt"
# args[8] is the gtable
chr.file <- args[8]

chr.size <- read.table(paste(script_path, "/genome_tables/", chr.file, sep=""))

# setting output files
r.output <- args[9]
overlap.output <- args[10]
npeaks.output <- args[11]