annotate README.rst @ 21:ce18b7a5ef4e draft default tip

planemo upload commit 1a6afbfa49a17d904e4e3cd01439f7ead41a0e33-dirty
author lecorguille
date Fri, 12 Apr 2019 10:46:37 -0400
parents 7fab8b835557
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
1
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
2 Changelog/News
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
3 --------------
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
4
20
7fab8b835557 planemo upload commit a5f400649acb64e1c66a92379027ac5abdb4f546
lecorguille
parents: 18
diff changeset
5 **Version 2.2.5 - 09/04/2019**
7fab8b835557 planemo upload commit a5f400649acb64e1c66a92379027ac5abdb4f546
lecorguille
parents: 18
diff changeset
6
7fab8b835557 planemo upload commit a5f400649acb64e1c66a92379027ac5abdb4f546
lecorguille
parents: 18
diff changeset
7 - UPGRADE: upgrade the CAMERA version from 1.34.0 to 1.38.1 (see CAMERA News_)
7fab8b835557 planemo upload commit a5f400649acb64e1c66a92379027ac5abdb4f546
lecorguille
parents: 18
diff changeset
8
18
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
9 **Version 2.2.2 - 01/03/2018**
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
10
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
11 - UPGRADE: upgrate the CAMERA version from 1.26.0 to 1.32.0
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
12
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
13
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
14 **Version 2.0.7 - 29/11/2017**
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
15
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
16 - BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
17
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
18
9
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
19 **Version 2.0.6 - 10/02/2017**
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
20
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
21 - IMPROVEMENT: Synchronize the variableMetadata export option with the other tools (xcms.group, xcms.fillpeaks, camera.annotate)
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
22
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
23
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
24 **Version 2.0.5 - 22/12/2016**
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
25
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
26 - IMPROVEMENT: add the possibility to add a personal Matrix of matching rules (ruleset)
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
27
972152941964 planemo upload commit a634879c0e651eb0eb7b435a107ee40cf30524fa
lecorguille
parents: 5
diff changeset
28
4
9a1a72ee9418 planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 0
diff changeset
29 **Version 2.0.4 - 21/04/2016**
9a1a72ee9418 planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 0
diff changeset
30
9a1a72ee9418 planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 0
diff changeset
31 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0
9a1a72ee9418 planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 0
diff changeset
32
9a1a72ee9418 planemo upload commit 2761472c8afc41d54cecd54cabd1c5a5713514a3-dirty
lecorguille
parents: 0
diff changeset
33
0
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
34 **Version 2.0.3 - 10/02/2016**
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
35
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
36 - BUGFIX: better management of errors. Datasets remained green although the process failed
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
37
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
38 - UPDATE: refactoring of internal management of inputs/outputs
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
39
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
40
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
41 **Version 2.0.1 - 07/06/2015**
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
42
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
43 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors.
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
44
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
45 - IMPROVEMENT: parameter labels have changed to facilitate their reading.
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
46
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
47
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
48 **Version 2.0.0 - 09/06/2015**
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
49
18
78d267387462 planemo upload commit 757700163128641f447d6fd089f2649d60a82f15
lecorguille
parents: 9
diff changeset
50 - NEW: combinexsAnnos Check CAMERA ion species annotation due to matching with opposite ion mode
0
6b850bdce2c5 planemo upload
mmonsoor
parents:
diff changeset
51
5
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
52
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
53 Test Status
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
54 -----------
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
55
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
56 Planemo test using conda: passed
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
57
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
58 Planemo test using source env.sh: passed
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
59
d245f818f20a planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
parents: 4
diff changeset
60 Planemo shed_test : passed