diff command-line-arguments.csv @ 7:869a88c0b36b draft

update

--- a/command-line-arguments.csv	Fri Sep 14 14:19:54 2018 -0400
+++ b/command-line-arguments.csv	Fri Sep 14 15:26:27 2018 -0400
@@ -1,5 +1,11 @@
-short flag,argument mask,data type,variable name
-o,1,character,report
-d,1,character,report.files_path
-g,1,character,significant_genes
-u,1,character,protein_sequences_urls
\ No newline at end of file
+short flag,argument mask,data type,variable name
+o,1,character,report
+d,1,character,report.files_path
+g,1,character,significant_genes
+u,1,character,protein_sequences_urls
+E,1,character,evalue_threshold
+T,1,character,score_threshold
+e,1,character,domE
+t,1,character,domT
+b,1,character,best_hit
+1,1,character,pfam_tbl_out