comparison split_fasta.xml @ 2:38435c74e795 draft default tip

working version

1:ecf34bd52987

	-s '$sink_message'
	-A '$fasta_input'
	-B '$number'
]]></command>
  <inputs>
    <param type="data" name="fasta_input" label="FASTA input" optional="False" multiple="False"/><param type="integer" name="number" label="Number" help="The number of files the FASTA file will be split into" optional="False" value="200" min="1"/></inputs>
  <outputs>
        <data name="report" format="html" label="${tool.name} report on ${on_string}" hidden="false"/><data name="sink_message" format="txt" label="${tool.name} log on ${on_string}" from_work_dir="warnings_and_errors.txt" hidden="false"/><collection name="list_collection" type="list" label="${tool.name} on ${on_string}"><discover_datasets pattern="__name_and_ext__" directory="fasta_files" visible="true"/></collection></outputs>
  <citations>
        <citation type="bibtex"><![CDATA[
            @article{allaire2016rmarkdown,
            title={rmarkdown: Dynamic Documents for R, 2016},
            author={Allaire, J and Cheng, Joe and Xie, Yihui and McPherson, Jonathan and Chang, Winston and Allen, Jeff

2:38435c74e795

	-s '$sink_message'
	-A '$fasta_input'
	-B '$number'
]]></command>
  <inputs>
    <param type="data" name="fasta_input" label="FASTA input" optional="False" format="fasta,fa" multiple="False"/><param type="integer" name="number" label="Number" help="The number of files the FASTA file will be split into" optional="False" value="200" min="1"/></inputs>
  <outputs>
        <data name="report" format="html" label="${tool.name} report on ${on_string}" hidden="false"/><data name="sink_message" format="txt" label="${tool.name} log on ${on_string}" from_work_dir="warnings_and_errors.txt" hidden="false"/><collection name="list_collection" type="list" label="${tool.name} on ${on_string}"><discover_datasets pattern="__name_and_ext__" directory="fasta_files" visible="false"/></collection></outputs>
  <citations>
        <citation type="bibtex"><![CDATA[
            @article{allaire2016rmarkdown,
            title={rmarkdown: Dynamic Documents for R, 2016},
            author={Allaire, J and Cheng, Joe and Xie, Yihui and McPherson, Jonathan and Chang, Winston and Allen, Jeff