# HG changeset patch
# User mingchen0919
# Date 1506545362 14400
# Node ID d330ce2d4663a3a4dc44789bc50a29bd7963c4d0
# Parent  d4a9c31d0046ebb921e5e5f707dd0129ab84f225
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_fastq_dump commit affb362adeb095389646b0c51738d24c2de3838d-dirty

diff -r d4a9c31d0046 -r d330ce2d4663 fastq_dump_pe.Rmd
--- a/fastq_dump_pe.Rmd	Wed Sep 27 16:43:52 2017 -0400
+++ b/fastq_dump_pe.Rmd	Wed Sep 27 16:49:22 2017 -0400
@@ -46,3 +46,12 @@
 }
 ```
 
+# Rename files
+
+```{r}
+old_files = paste0('./read_files_directory/', list.files('./read_files_directory'))
+new_files = gsub('_1', '_forward', old_files)
+new_files = gsub('_2', '_reverse', new_files)
+file.copy('./read_files_directory/')
+```
+