Mercurial > repos > mingchen0919 > rmarkdown_fastq_dump

diff fastq_dump_pe_render.R @ 19:42e154ba2d35 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_fastq_dump commit c4beda20972367ab7d47a058a01a5f6fe492255d-dirty
author mingchen0919
date Wed, 27 Sep 2017 21:15:56 -0400
parents 883f102eb227
children 3c859d094074
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--- a/fastq_dump_pe_render.R	Wed Sep 27 20:43:32 2017 -0400
+++ b/fastq_dump_pe_render.R	Wed Sep 27 21:15:56 2017 -0400
@@ -54,7 +54,6 @@
 library(dplyr)
 
 #----- 1. create the report directory ------------------------
-# system(paste0('mkdir -p ', opt$output_dir))
 dir.create(opt$output_dir)
 
 #----- 2. generate Rmd files with Rmd templates --------------