comparison fastq_dump_se.Rmd @ 11:d4a9c31d0046 draft

planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_fastq_dump commit affb362adeb095389646b0c51738d24c2de3838d-dirty

10:057a6b742899

    command = paste0('fastq-dump --fasta ', '-O read_files_directory ', id)
  } else {
    command = paste0('fastq-dump ', '-O read_files_directory ', id)
  }
  print(command)
  #system(command = command)
}
```

11:d4a9c31d0046

    command = paste0('fastq-dump --fasta ', '-O read_files_directory ', id)
  } else {
    command = paste0('fastq-dump ', '-O read_files_directory ', id)
  }
  print(command)
  system(command = command)
}
```