# HG changeset patch # User mingchen0919 # Date 1506453590 14400 # Node ID 0d86b36606d3ae7b45d390d9da20fc4823a92772 # Parent 47652dcfd07ce4b0f89c7ff81019164dc648df34 planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 88ca36a41aa577ba888cee39cf81b176bf7e68db-dirty diff -r 47652dcfd07c -r 0d86b36606d3 collection_paired.Rmd --- a/collection_paired.Rmd Tue Sep 26 14:59:08 2017 -0400 +++ b/collection_paired.Rmd Tue Sep 26 15:19:50 2017 -0400 @@ -23,7 +23,7 @@ # Rename files ```{r} -file.copy("FORWARD_INPUT", './forward.FORMAT') -file.copy("REVERSE_INPUT", './reverse.FORMAT') +file.copy("FORWARD_INPUT", './OUTPUT_DIR/forward.FORMAT') +file.copy("REVERSE_INPUT", './OUTPUT_DIR/reverse.FORMAT') ``` diff -r 47652dcfd07c -r 0d86b36606d3 collection_paired.xml --- a/collection_paired.xml Tue Sep 26 14:59:08 2017 -0400 +++ b/collection_paired.xml Tue Sep 26 15:19:50 2017 -0400 @@ -47,6 +47,8 @@ + + \ No newline at end of file