Mercurial > repos > mingchen0919 > rmarkdown_collection_builder

diff collection_list_paired_render.R @ 22:a25b427a1f38 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 436d91722b309f61890d13d7ed28cd43c79a5c74-dirty
author mingchen0919
date Mon, 25 Sep 2017 23:15:32 -0400
parents 2f6a7c67440f
children 025ca0833787
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line diff
--- a/collection_list_paired_render.R	Mon Sep 25 23:09:55 2017 -0400
+++ b/collection_list_paired_render.R	Mon Sep 25 23:15:32 2017 -0400
@@ -73,7 +73,7 @@
     gsub('REVERSE_FILE_LIST', opt$reverse_file_list, x)
   }) %>%
   (function(x) {
-    gsub('OUTPUT_DIR', opt$list_collection_dir, x)
+    gsub('OUTPUT_DIR', opt$list_paired_collection_dir, x)
   }) %>%
   (function(x) {
     fileConn = file('list_paired_collection.Rmd')