Mercurial > repos > mingchen0919 > rmarkdown_collection_builder

diff collection_list_paired.Rmd @ 27:5982d63cdeda draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_collection_builder commit 436d91722b309f61890d13d7ed28cd43c79a5c74-dirty
author mingchen0919
date Mon, 25 Sep 2017 23:42:32 -0400
parents 5391cd0565c9
children bf6e2d98e280
line wrap: on
line diff
--- a/collection_list_paired.Rmd	Mon Sep 25 23:38:47 2017 -0400
+++ b/collection_list_paired.Rmd	Mon Sep 25 23:42:32 2017 -0400
@@ -43,7 +43,7 @@
 new_files = gsub('\\.dat', '_1\\.FORMAT', original_files)
 # rename files
 file.copy(paste0('./forward_files_directory/', original_files),
-          paste0('OUTPUT_DIR', new_files))
+          paste0('./files_directory', new_files))
 ```
 
 ## Reverse inputs
@@ -61,6 +61,6 @@
 new_files = gsub('\\.dat', '_2\\.FORMAT', original_files)
 # rename files
 file.copy(paste0('./reverse_files_directory/', original_files),
-          paste0('OUTPUT_DIR', new_files))
+          paste0('./files_directory', new_files))
 ```