Mercurial > repos > mingchen0919 > rmarkdown_bdss_client

changeset 1:d9aeb2e7c53d draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_bdss_client commit 36de2ee9751d1ef5db0c76c217fd5ba262ca3739-dirty
author mingchen0919
date Tue, 10 Oct 2017 20:21:29 -0400
parents 614e9553f366
children 979136fc0650
files bdss_client_sra_pe.xml bdss_client_sra_se.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/bdss_client_sra_pe.xml	Tue Oct 10 20:19:52 2017 -0400
+++ b/bdss_client_sra_pe.xml	Tue Oct 10 20:21:29 2017 -0400
@@ -41,8 +41,8 @@
                label="Display analysis code in report?"/>
     </inputs>
     <outputs>
-        <data format="html" name="report" label="Fastq-dump report" />
-        <collection type="list:paired" name="list_collection" label="Fastq-dump (paired end reads)">
+        <data format="html" name="report" label="BDSS report" />
+        <collection type="list:paired" name="list_collection" label="BDSS fastq/fasta (paired end reads)">
             <discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)\.(?P&lt;ext&gt;[^\._]+)?" directory="read_files_directory"/>
         </collection>
         <data format="txt" name="sink_message" label="Warnings and Errors" from_work_dir="warnings_and_errors.txt" />
--- a/bdss_client_sra_se.xml	Tue Oct 10 20:19:52 2017 -0400
+++ b/bdss_client_sra_se.xml	Tue Oct 10 20:21:29 2017 -0400
@@ -39,8 +39,8 @@
         <param type="boolean" name="echo" truevalue="TRUE" falsevalue="FALSE" checked="false" label="Display analysis code in report?" />
     </inputs>
     <outputs>
-        <data format="html" name="report" label="Fastq-dump report" />
-        <collection type="list" name="list_collection" label="Fastq-dump (single end reads)">
+        <data format="html" name="report" label="BDSS report" />
+        <collection type="list" name="list_collection" label="BDSS fastq/fasta (single end reads)">
             <discover_datasets pattern="__name_and_ext__" directory="read_files_directory" />
         </collection>
         <data format="txt" name="sink_message" label="Warnings and Errors" from_work_dir="warnings_and_errors.txt" />