Mercurial > repos > mingchen0919 > rmarkdown_bdss_client
diff bdss_client_sra_render.R @ 22:89cc5b026494 draft
planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_bdss_client commit 8d95d985955944734cd00ac94346e1197a4feb20-dirty
| author | mingchen0919 |
|---|---|
| date | Sat, 14 Oct 2017 22:59:06 -0400 |
| parents | a709a705ce09 |
| children |
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--- a/bdss_client_sra_render.R Sat Oct 14 19:54:57 2017 -0400 +++ b/bdss_client_sra_render.R Sat Oct 14 22:59:06 2017 -0400 @@ -34,7 +34,8 @@ ##------- 1. input data --------------------- args_list=list() args_list$SRA_IDS_SE = c('sra_ids_se', 'i', '1', 'character') -args_list$SRA_IDS_PE = c('sra_ids_pe', 'i', '1', 'character') +args_list$SRA_IDS_PE = c('sra_ids_pe', 'p', '1', 'character') +args_list$FORMAT = c('format', 'f', '1', 'character') args_list$ECHO = c('echo', 'e', '1', 'character') ##--------2. output report and outputs -------------- args_list$REPORT_HTML = c('report_html', 'r', '1', 'character')