Mercurial > repos > mingchen0919 > aurora_statonlab_hmmscan_merger
changeset 2:ae3909607532 draft default tip
planemo upload commit bda06a1967f1d712f8235b066e4c937d88cb6107
author | mingchen0919 |
---|---|
date | Sun, 16 Sep 2018 22:47:48 -0400 |
parents | aee65d1b1840 |
children | |
files | rmarkdown_report.Rmd |
diffstat | 1 files changed, 4 insertions(+), 1 deletions(-) [+] |
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--- a/rmarkdown_report.Rmd Sun Sep 16 17:39:54 2018 -0400 +++ b/rmarkdown_report.Rmd Sun Sep 16 22:47:48 2018 -0400 @@ -106,7 +106,10 @@ table_list = list() table_list[[1]] = tags$tr(lapply(colnames(pfams_df), tags$th)) for (i in 1:nrow(pfams_df)) { - row = c(pfams_df[i, c('target_name', 'accession')], + target_name_url = tags$a(pfams_df[i, 'target_name'], href=paste0('https://pfam.xfam.org/family/', pfams_df[i, 'target_name'])) + accession_url = tags$a(pfams_df[i, 'accession'], href=paste0('https://pfam.xfam.org/family/', pfams_df[i, 'accession'])) + row = c(list(tags$ul(target_name_url)), + list(tags$ul(accession_url)), lapply(pfams_df[i, -c(1:2)], add_links)) table_list[[i+1]] = tags$tr(lapply(row, tags$td)) }