Mercurial > repos > mingchen0919 > aurora_star_site
annotate 02_mapping.Rmd @ 5:9681e90f3e28 draft
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author | mingchen0919 |
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date | Tue, 01 May 2018 11:15:25 -0400 |
parents | 42f9bad52d54 |
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1 --- |
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2 title: 'Mapping' |
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3 output: |
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4 html_document: |
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5 highlight: pygments |
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6 --- |
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7 |
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8 ```{r setup, include=FALSE, warning=FALSE, message=FALSE} |
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9 knitr::opts_chunk$set(error = TRUE, echo = FALSE) |
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10 ``` |
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11 |
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12 |
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13 ```{r echo=FALSE,results='asis'} |
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14 # display content of the job-script.sh file. |
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15 cat('```bash\n') |
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16 cat(readLines(paste0(Sys.getenv('REPORT_FILES_PATH'), '/mapping.sh')), sep = '\n') |
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17 cat('\n```') |
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18 ``` |