# HG changeset patch # User mingchen0919 # Date 1543542474 18000 # Node ID 7c792cf4a5cf6ee8b9b3e155d38f9e30c0e52a8a # Parent 8ae4b7a00bf762fc978ec5eea3b72fcf06c64e61 planemo upload commit ac620fd79bab10b47e40703401a02d7292321258-dirty diff -r 8ae4b7a00bf7 -r 7c792cf4a5cf rmarkdown_report.Rmd --- a/rmarkdown_report.Rmd Thu Nov 29 20:21:48 2018 -0500 +++ b/rmarkdown_report.Rmd Thu Nov 29 20:47:54 2018 -0500 @@ -93,11 +93,13 @@ library(plotly) library(ggplot2) len_dist$count = as.numeric(len_dist$count) -pp = ggplot(data = len_dist, aes(1:nrow(len_dist), count)) + +labels = as.character(len_dist$length) +len_dist$length = 1:nrow(len_dist) +pp = ggplot(data = len_dist, aes(length, count)) + geom_line(color='red') + scale_x_continuous(name = 'Length', breaks = 1:nrow(len_dist), - labels = as.character(len_dist$length)) + + labels = labels) + theme(axis.text.x = element_text(angle = 90, hjust = 1)) + ylab('Count') + ggtitle('Length distribution')