Mercurial > repos > mingchen0919 > aurora_htseq_site

view expose-outputs-to-galaxy-history.sh @ 10:ee79ca0002b4 draft

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planemo upload commit 363ef0a73d874c67326a67f51a78328906951248-dirty
author mingchen0919
date Fri, 30 Nov 2018 22:17:33 -0500
parents a40d5db8687e
children
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# change directory to tool outputs directory
cd ${REPORT_FILES_PATH}

# copy outputs from tool outputs directory to corresponding galaxy output path
if [ -e "rmarkdown_report.html" ]; then
  cp rmarkdown_report.html ${REPORT}
fi

if [ -e "index.html" ]; then
  cp index.html ${REPORT}
fi

if [ -e "count_data.csv" ];then
  cp count_data.csv ${X_c}
fi