Mercurial > repos > mingchen0919 > aurora_htseq_site

view expose-outputs-to-galaxy-history.sh @ 7:3dbbe1eba9de draft

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planemo upload commit 0b6e8a54187fd05c2bd373c8a0d7d23590240404-dirty
author mingchen0919
date Mon, 14 May 2018 14:23:21 -0400
parents a40d5db8687e
children
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# change directory to tool outputs directory
cd ${REPORT_FILES_PATH}

# copy outputs from tool outputs directory to corresponding galaxy output path
if [ -e "rmarkdown_report.html" ]; then
  cp rmarkdown_report.html ${REPORT}
fi

if [ -e "index.html" ]; then
  cp index.html ${REPORT}
fi

if [ -e "count_data.csv" ];then
  cp count_data.csv ${X_c}
fi