Mercurial > repos > mingchen0919 > aurora_htseq_site
diff expose-outputs-to-galaxy-history.sh @ 4:b3e5f4753856 draft
planemo upload commit 104ae24ee30761a0099eeb91362ed1e3e13aba4b-dirty
| author | mingchen0919 |
|---|---|
| date | Tue, 01 May 2018 11:20:13 -0400 |
| parents | |
| children | a40d5db8687e |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/expose-outputs-to-galaxy-history.sh Tue May 01 11:20:13 2018 -0400 @@ -0,0 +1,13 @@ +# change directory to tool outputs directory +cd ${REPORT_FILES_PATH} + +# copy outputs from tool outputs directory to corresponding galaxy output path +if [ -e "rmarkdown_report.html" ]; then + cp rmarkdown_report.html ${REPORT} +fi + +if [ -e "index.html" ]; then + cp index.html ${REPORT} +fi + +cp count_data.csv ${X_c} \ No newline at end of file