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annotate index.Rmd @ 10:ee79ca0002b4 draft

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planemo upload commit 363ef0a73d874c67326a67f51a78328906951248-dirty
author mingchen0919
date Fri, 30 Nov 2018 22:17:33 -0500
parents 467a1895c718
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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3 ```{css echo=FALSE}
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4 # code chunks scrollable
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5 pre code, pre, code {
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6 white-space: pre !important;
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7 overflow-x: scroll !important;
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8 word-break: keep-all !important;
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9 word-wrap: initial !important;
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10 }
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11 ```
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14 ```{r, echo=FALSE}
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15 # to make the css theme to work, <link></link> tags cannot be added directly
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16 # as <script></script> tags as below.
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17 # it has to be added using a code chunk with the htmltool functions!!!
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18 css_link = tags$link()
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19 css_link$attribs = list(rel="stylesheet", href="vakata-jstree-3.3.5/dist/themes/default/style.min.css")
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20 css_link
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21 ```
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23 ```{r, eval=FALSE, echo=FALSE}
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24 # this code chunk is purely for adding comments
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25 # below is to add jQuery and jstree javascripts
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26 ```
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27 <script src="https://code.jquery.com/jquery-3.3.1.min.js"></script>
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28 <script src="vakata-jstree-3.3.5/dist/jstree.min.js"></script>
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30 ```{r, eval=FALSE, echo=FALSE}
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31 # The script below is used to avoid conflicts between different javascript labraries
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32 ```
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33
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34 <script>
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35 jQuery.noConflict();
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37 jQuery( document ).ready(function( $ ) {
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38 // You can use the locally-scoped $ in here as an alias to jQuery.
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39 $( "jstree" ).hide();
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40 });
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42 // The $ variable in the global scope has the prototype.js meaning.
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43 window.onload = function(){
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44 var mainDiv = $( "main" );
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45 }
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46 </script>
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48 ```{r, eval=FALSE, echo=FALSE}
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49 # this code chunk is purely for adding comments
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50 # javascript code below is to build the file tree interface
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51 # see this for how to implement opening hyperlink: https://stackoverflow.com/questions/18611317/how-to-get-i-get-leaf-nodes-in-jstree-to-open-their-hyperlink-when-clicked-when
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52 ```
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53 <script>
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54 $(function () {
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55 // create an instance when the DOM is ready
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56 $('#jstree').jstree().bind("select_node.jstree", function (e, data) {
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57 window.open( data.node.a_attr.href, data.node.a_attr.target )
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58 });
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59 });
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60 </script>
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61
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62 ## Outputs
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63
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64 ```{r, echo=FALSE}
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65 # create a div container to store the file tree interface
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66 library(htmltools)
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67 tags$div(
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68 id="jstree",
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69 file_tree(Sys.getenv('REPORT_FILES_PATH'))
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70 )
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71 ```