Mercurial > repos > mingchen0919 > aurora_htseq

view expose-outputs-to-galaxy-history.sh @ 23:24558ebcc9c3 draft

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planemo upload commit 9d80f8019f1eb21b0bc6fdb4e3ae7684174f6ca4-dirty
author mingchen0919
date Fri, 30 Nov 2018 14:45:35 -0500
parents 851112a0071d
children
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# change directory to tool outputs directory
cd ${REPORT_FILES_PATH}

# copy outputs from tool outputs directory to corresponding galaxy output path
if [ -e "rmarkdown_report.html" ]; then
  cp rmarkdown_report.html ${REPORT}
fi

if [ -e "index.html" ]; then
  cp index.html ${REPORT}
fi

if [ -e "count_data.csv" ];then
  cp count_data.csv ${X_c}
fi